All QA can be setup as being automatically triggered (based on modality or other parameters) just after uploading with default parameters set when adding the QA pipeline into the project.
Outline:
1. Phantom QA
2. fMRI QA
2a. resting-state
2b. task-state, which can include stimulus time course for me to calculate correlation with head motion.
3. sMRI QA which includes automatic lesion detection for stroke studies.
References:
1. Xiaowei Song, Xue Wang, Kate Alpert, Yufen Chen, Lejian Huang, Lei Wang, Todd Parrish. Rapid automatic comprehensive quality assurance metrics evaluation for Neuroimaging studies. (Organization for Human Brain Mapping Annual Meeting, 2015)